Basic statistics in Prism

E-Learning

basic statistics in prism

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Please register on the training website to access this e-learning course. There are no online or face-to-face sessions.

Data sets you need in this course.

Questions can be asked by contacting janick.mathys@vib.be

Check our Basic statistics theory course on this elearning system for the statistical background.

Course materials

Graphpad tutorials:

- Prism user guide: how to use Prism

- Prism statistics guide: the theoretical background of the statistical analyses in Prism

- Prism curve fitting guide: how to do regression in Prism

- Prism video tutorials

Course Content

Lesson Content

0% Complete 0/2 Steps

Prism user interface

Table types in Prism

Lesson Content

0% Complete 0/18 Steps

Getting the data into Prism

Checking normality

Unpaired t test

Report the outcome of the unpaired t test

Graph the results of the unpaired t test

Create a new table

Use the first row as column names

Report and graph the outcome of a Mann Whitney test

Compare 2 groups of paired data

Report the outcome of a paired t test

Graph the results of a paired t test

Comparing ratios

Compare more than 2 groups

Report the outcome of a one-way ANOVA

Report the outcome of a Kruskal Wallis test

Nested one-way ANOVA

Lesson Content

0% Complete 0/8 Steps

A data set with two factors

Compare groups defined by two factors

Limitations of two-way ANOVA in Prism

Finding DE genes / proteins / metabolites

Only use Prism to analyze small scale omics data

Multiple tests, one per row in Prism

Volcano plot and heat map

Three-way ANOVA

Lesson Content

0% Complete 0/5 Steps

The user interface for graphs

Set the characteristics of a graph: color scheme, size

Create a layout

Make graphs consistent

Lesson Content

0% Complete 0/11 Steps

Import data for linear regression

Linear regression – compare slopes

Results of the linear regression

Format of data for a standard curve

Interpolation from a standard curve

Add Interpolated values to the plot

Nonlinear regression: dose-response data

Compare dose-response curves

Data for correlation analysis

Correlation (with a user-defined transformation)

Correlation matrix and correlogram

Lesson Content

0% Complete 0/2 Steps

Import data for chi square test

Chi square test

Lesson Content

0% Complete 0/2 Steps

Survival analysis

Create the Kaplan Maier plot

Contributors: Janick Mathys

Created by Janick Mathys

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